STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7EJ04_TRICAReverse transcriptase domain-containing protein. (467 aa)    
Predicted Functional Partners:
GLEAN_10738
Integrase catalytic domain-containing protein.
 
     0.577
D7GXX5_TRICA
Retrovirus-related Pol polyprotein from transposon gypsy-like Protein.
 
     0.542
D7EK81_TRICA
Integrase catalytic domain-containing protein.
 
     0.520
D6X3E3_TRICA
Retrovirus-related Pol polyprotein from transposon 17.6-like Protein.
 
     0.519
D7EKU9_TRICA
Integrase catalytic domain-containing protein.
 
     0.518
D2A4D3_TRICA
Uncharacterized protein.
  
     0.516
A0A139WA70
Retrovirus-related Pol polyprotein from transposon 297-like Protein.
  
     0.511
GLEAN_10736
RT_RNaseH_2 domain-containing protein.
  
     0.506
D7EKC6_TRICA
Integrase catalytic domain-containing protein.
 
     0.504
D7EJ62_TRICA
Integrase catalytic domain-containing protein.
 
     0.497
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.