node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADR32857.1 | ADR32858.1 | Sulku_0190 | Sulku_0191 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | 0.999 |
ADR32857.1 | rplA | Sulku_0190 | Sulku_2273 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.995 |
ADR32857.1 | rplB | Sulku_0190 | Sulku_0193 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
ADR32857.1 | rplK | Sulku_0190 | Sulku_2274 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
ADR32857.1 | rpmG | Sulku_0190 | Sulku_2277 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | LSU ribosomal protein L33P; InterPro IPR018264: IPR001705; KEGG: tdn:Suden_0346 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; manually curated; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family. | 0.991 |
ADR32857.1 | rpsG | Sulku_0190 | Sulku_2267 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.994 |
ADR32857.1 | rpsJ | Sulku_0190 | Sulku_0189 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
ADR32857.1 | rpsL | Sulku_0190 | Sulku_2268 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.993 |
ADR32857.1 | tsf | Sulku_0190 | Sulku_0236 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.947 |
ADR32857.1 | tuf | Sulku_0190 | Sulku_2278 | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.993 |
ADR32858.1 | ADR32857.1 | Sulku_0191 | Sulku_0190 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | COGs: COG0087 Ribosomal protein L3; InterPro IPR019927: IPR000597; KEGG: wsu:WS1716 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial. | 0.999 |
ADR32858.1 | rplA | Sulku_0191 | Sulku_2273 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.997 |
ADR32858.1 | rplB | Sulku_0191 | Sulku_0193 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.998 |
ADR32858.1 | rplK | Sulku_0191 | Sulku_2274 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.993 |
ADR32858.1 | rpmG | Sulku_0191 | Sulku_2277 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | LSU ribosomal protein L33P; InterPro IPR018264: IPR001705; KEGG: tdn:Suden_0346 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; manually curated; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family. | 0.990 |
ADR32858.1 | rpsG | Sulku_0191 | Sulku_2267 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
ADR32858.1 | rpsJ | Sulku_0191 | Sulku_0189 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
ADR32858.1 | rpsL | Sulku_0191 | Sulku_2268 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
ADR32858.1 | tsf | Sulku_0191 | Sulku_0236 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.955 |
ADR32858.1 | tuf | Sulku_0191 | Sulku_2278 | COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: tdn:Suden_0287 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.994 |