STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9IT36_BOMMOUncharacterized protein. (993 aa)    
Predicted Functional Partners:
Q2F5M1_BOMMO
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.670
E5LAN2_BOMMO
Phosphotriesterase-like protein.
     
 0.545
H9JD09_BOMMO
Ubiquitin-like domain-containing protein.
    
 0.542
H9JD10_BOMMO
AN1-type domain-containing protein.
    
 0.542
H9JWX3_BOMMO
B30.2/SPRY domain-containing protein.
      
 0.537
H9J0J0_BOMMO
Uncharacterized protein.
  
     0.525
H9JI22_BOMMO
WD_REPEATS_REGION domain-containing protein.
    
 0.521
H9IZY8_BOMMO
Uncharacterized protein.
    
 0.443
H9JHX1_BOMMO
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 
 0.439
H9IWF0_BOMMO
MRG domain-containing protein.
   
  
 0.412
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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