STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9IVK3_BOMMORibosomal_L28e domain-containing protein. (209 aa)    
Predicted Functional Partners:
H9JEK8_BOMMO
Brix domain-containing protein.
   
 
 0.997
H9J134_BOMMO
Uncharacterized protein.
   
 
 0.996
Nopp34
RRM domain-containing protein.
   
 
 0.996
H9JS63_BOMMO
TRASH domain-containing protein.
   
   0.996
H9JN27_BOMMO
Uncharacterized protein.
   
 
 0.995
H9J7G0_BOMMO
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.994
H9IT94_BOMMO
CP-type G domain-containing protein.
   
 
 0.993
H9JGR9_BOMMO
Uncharacterized protein.
   
 
 0.993
H9JCL8_BOMMO
Uncharacterized protein.
   
 
 0.992
H9JKD2_BOMMO
Brix domain-containing protein.
   
   0.991
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.