STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9J3X0_BOMMOUncharacterized protein. (411 aa)    
Predicted Functional Partners:
H9IXF9_BOMMO
Uncharacterized protein.
   
    0.674
H9J1M6_BOMMO
Uncharacterized protein.
    
 0.645
H9J6Z6_BOMMO
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.625
H9JQ14_BOMMO
Uncharacterized protein.
   
 
 0.595
H9J8J7_BOMMO
Uncharacterized protein.
   
    0.580
H9JKQ2_BOMMO
Uncharacterized protein.
   
    0.580
H9IZU4_BOMMO
Uncharacterized protein.
    
 
 0.558
H9JMC0_BOMMO
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 0.545
H9JDQ7_BOMMO
Uncharacterized protein.
   
  
 0.544
H9JH83_BOMMO
Uncharacterized protein; Belongs to the actin family.
    
 0.538
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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