STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JD85_BOMMOUncharacterized protein. (464 aa)    
Predicted Functional Partners:
H9J9K7_BOMMO
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
    
 
 0.935
H9IX64_BOMMO
Peptidase_M28 domain-containing protein.
    
 
 0.932
H9JLA8_BOMMO
Uncharacterized protein.
    
 
 0.899
Sec61alpha
Transport protein Sec61 alpha subunit.
   
 
 0.869
Q2F5L5_BOMMO
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.794
Q1HPU6_BOMMO
Sec61p gamma subunit; Transport protein SEC61; Transport protein Sec61 gamma subunit.
    
   0.782
RpL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.763
RpL3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.755
RpL11
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.754
RpL13A
Ribosomal protein L13A.
   
   0.751
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.