STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tra2RRM domain-containing protein. (230 aa)    
Predicted Functional Partners:
H9JU84_BOMMO
Uncharacterized protein.
   
 0.965
Rbp1
RRM domain-containing protein.
   
 0.963
H9J7Z3_BOMMO
RRM domain-containing protein.
  
 0.937
Sfrs6
Uncharacterized protein.
   
 0.852
H9J6R3_BOMMO
RRM domain-containing protein.
  
 0.818
H9JLJ5_BOMMO
Uncharacterized protein.
   
 0.804
H9IWE1_BOMMO
Uncharacterized protein.
   
 0.803
Dsx
DM domain-containing protein.
    
 
 0.778
H9JBA1_BOMMO
Uncharacterized protein.
  
 0.766
H9JA60_BOMMO
Uncharacterized protein.
  
 0.759
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.