STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JP63_BOMMOPX domain-containing protein. (166 aa)    
Predicted Functional Partners:
H9IS93_BOMMO
Uncharacterized protein.
   
 0.979
H9JXC9_BOMMO
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.970
H9JXD0_BOMMO
Uncharacterized protein.
   
 0.970
H9JK95_BOMMO
VWFA domain-containing protein.
   
 0.967
H9JUH7_BOMMO
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.898
H9J4K2_BOMMO
Uncharacterized protein.
    
 0.870
H9JVN1_BOMMO
Uncharacterized protein.
 
      0.829
H9JQ25_BOMMO
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.734
H9JBZ0_BOMMO
Uncharacterized protein.
    
 
 0.679
H9J3C3_BOMMO
PX domain-containing protein.
   
 
0.674
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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