STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JSS1_BOMMOBeta-Casp domain-containing protein. (265 aa)    
Predicted Functional Partners:
H9JH87_BOMMO
WD_REPEATS_REGION domain-containing protein.
   
 0.997
Ssu72
Uncharacterized protein.
   
 0.995
H9J1G1_BOMMO
Fip1 domain-containing protein.
    
 0.993
H9JQW4_BOMMO
Uncharacterized protein.
   
 0.993
Q2F5U4_BOMMO
WD40 protein.
   
 0.992
H9JWC8_BOMMO
CPSF_A domain-containing protein.
   
 0.981
H9JFV2_BOMMO
Uncharacterized protein.
   
 0.975
H9IS58_BOMMO
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.971
H9JAD1_BOMMO
RRM domain-containing protein.
   
 0.969
H9JUL8_BOMMO
SER_THR_PHOSPHATASE domain-containing protein.
   
 0.954
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.