STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9JTX0_BOMMOUncharacterized protein. (260 aa)    
Predicted Functional Partners:
H9JQG5_BOMMO
Uncharacterized protein.
   
 0.996
H9JDY7_BOMMO
Uncharacterized protein.
   
 0.992
RpS30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.992
H9JX75_BOMMO
Uncharacterized protein.
   
 0.990
H9JT28_BOMMO
Bms1-type G domain-containing protein.
   
 0.989
H9JCE7_BOMMO
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.980
RpS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.972
RpS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
  0.968
RpS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.967
RpS23
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
  0.967
Your Current Organism:
Bombyx mori
NCBI taxonomy Id: 7091
Other names: B. mori, domestic silkworm, silk moth, silkworm
Server load: low (14%) [HD]