STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV66079.1Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ddr:Deide_3p02570 putative sugar uptake ABC transporter, periplasmic component; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative sugar uptake ABC transporter, periplasmic component; PFAM: family. (325 aa)    
Predicted Functional Partners:
ADV66080.1
COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: ddr:Deide_3p02580 putative sugar uptake ABC transporter, ATP-binding component; putative monosaccharide-transporting ATPase; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative sugar uptake ABC transporter, ATP-binding component; putative Monosaccharide-transporting ATPase; PFAM: ABC transporter.
 0.992
ADV66082.1
ABC-type transporter, integral membrane subunit; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ddr:Deide_3p02600 putative ribose/xylose/arabinose/galactoside ABC transporter; PFAM: ABC transporter permease; SPTR: Putative ribose/xylose/arabinose/galactoside ABC transporter; PFAM: Branched-chain amino acid transport system / permease component.
 0.992
ADV66081.1
ABC-type transporter, integral membrane subunit; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ddr:Deide_3p02590 putative ribose/xylose/arabinose/galactoside ABC transporter, permease component; PFAM: ABC transporter permease; SPTR: Putative ribose/xylose/arabinose/galactoside ABC transporter, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 0.991
ADV65917.1
COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ddr:Deide_3p02580 putative sugar uptake ABC transporter, ATP-binding component; putative monosaccharide-transporting ATPase; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative sugar uptake ABC transporter, ATP-binding component; putative Monosaccharide-transporting ATPase; PFAM: ABC transporter.
 0.983
ADV65919.1
ABC-type transporter, integral membrane subunit; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ddr:Deide_3p02600 putative ribose/xylose/arabinose/galactoside ABC transporter; PFAM: ABC transporter permease; SPTR: Putative ribose/xylose/arabinose/galactoside ABC transporter; PFAM: Branched-chain amino acid transport system / permease component.
 0.983
ADV65918.1
ABC-type transporter, integral membrane subunit; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ddr:Deide_3p02590 putative ribose/xylose/arabinose/galactoside ABC transporter, permease component; PFAM: ABC transporter permease; SPTR: Putative ribose/xylose/arabinose/galactoside ABC transporter, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 0.981
ADV67862.1
GAF sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003018: IPR003661: IPR003594: IPR 001789; KEGG: ddr:Deide_2p01010 putative histidine kinase, hybrid; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; HAMP linker domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; HAMP linker domain; Signal transduction r [...]
   
 
 0.949
ADV65916.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ddr:Deide_3p02570 putative sugar uptake ABC transporter, periplasmic component; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative sugar uptake ABC transporter, periplasmic component; PFAM: family.
  
  
 
0.902
ADV67200.1
Diguanylate cyclase/phosphodiesterase; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000160: IPR001633; KEGG: ddr:Deide_18060 putative diguanylate cyclase/phosphodiesterase; putative membrane protein; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SPTR: Putative diguanylate cyclase/phosphodiesterase; putative membrane protein; TIGRFAM: Diguanylate cyclase, predicted; PFAM: EAL domain; GGDEF domain; TIGRFAM: d [...]
  
 
 0.668
ADV66089.1
COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003661: IPR003594: IPR001789: IPR003018; KEGG: dge:Dgeo_2096 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; GAF; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: [...]
 
 
 
 0.600
Your Current Organism:
Deinococcus maricopensis
NCBI taxonomy Id: 709986
Other names: D. maricopensis DSM 21211, Deinococcus maricopensis DSM 21211, Deinococcus maricopensis LB-34, Deinococcus maricopensis str. DSM 21211, Deinococcus maricopensis strain DSM 21211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.