STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48981.1Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: kra:Krad_1234 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Hemolysin containing CBS domains protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain. (451 aa)    
Predicted Functional Partners:
ADU48980.1
Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550; KEGG: kra:Krad_1235 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Hemolysin containing CBS domains protein; PFAM: CBS domain; Domain of unknown function DUF21.
 
   
0.910
ADU48982.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: kse:Ksed_18430 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system ATPase component; PFAM: ABC transporter.
 
    0.636
ADU47350.1
Protein of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550; KEGG: gob:Gobs_2950 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21.
 
   
0.612
ADU48983.1
KEGG: jde:Jden_1805 hypothetical protein; SPTR: Putative ABC transport system membrane protein.
  
    0.602
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
    0.419
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.