STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49052.1KEGG: pfr:PFREUD_09900 hypothetical protein; SPTR: Putative uncharacterized protein. (53 aa)    
Predicted Functional Partners:
ADU49051.1
Protein of unknown function DUF45; COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: bcv:Bcav_2891 protein of unknown function DUF45; PFAM: protein of unknown function DUF45; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF45.
       0.558
ADU49102.1
KEGG: mav:MAV_1356 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3117).
  
     0.479
ADU49053.1
KEGG: cms:CMS_1890 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.471
ADU47022.1
KEGG: fre:Franean1_0333 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.428
ADU49054.1
ABC-1 domain-containing protein; COGs: COG0661 unusual protein kinase; InterPro IPR000719: IPR004147: IPR002575; KEGG: kfl:Kfla_5331 ABC-1 domain protein; PFAM: ABC-1 domain-containing protein; aminoglycoside phosphotransferase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC1 family.
       0.428
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.