STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49996.1FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076: IPR003042; KEGG: mpa:MAP2644 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase; PFAM: FAD binding domain. (361 aa)    
Predicted Functional Partners:
ADU49998.1
Chalcone and stilbene synthase domain protein; COGs: COG3424 naringenin-chalcone synthase; InterPro IPR011141: IPR001099: IPR012328; KEGG: kse:Ksed_00500 predicted naringenin-chalcone synthase; PFAM: chalcone and stilbene synthase domain protein; SPTR: Chalcone and stilbene synthases domain-containing protein; PFAM: FAE1/Type III polyketide synthase-like protein; Chalcone and stilbene synthases, C-terminal domain.
 
  
 0.979
ADU49997.1
Isoprenylcysteine carboxyl methyltransferase; COGs: COG1755 conserved hypothetical protein; InterPro IPR007269; KEGG: kfl:Kfla_2548 isoprenylcysteine carboxyl methyltransferase; PFAM: Isoprenylcysteine carboxyl methyltransferase; SPTR: Isoprenylcysteine carboxyl methyltransferase; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family.
 
  
 0.978
ADU49999.1
InterPro IPR000537; KEGG: nml:Namu_5114 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Putative integral membrane protein; PFAM: UbiA prenyltransferase family.
 
  
 0.917
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.822
ADU48900.1
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255: IPR014730; KEGG: kfl:Kfla_4923 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Putative electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.743
ADU48899.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308: IPR018206: IPR014730: IPR014731; KEGG: kse:Ksed_09610 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Putative electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.584
ADU49485.1
Hypothetical protein; KEGG: art:Arth_3788 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor.
   
  
 0.528
ADU49957.1
KEGG: art:Arth_4387 hypothetical protein; SPTR: Putative uncharacterized protein.
   
  
 0.528
ADU47330.1
Cobaltochelatase CobN subunit; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672: IPR011953; KEGG: nml:Namu_0145 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: Cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
  
 0.513
ADU47337.1
Protoporphyrin IX magnesium-chelatase; COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593: IPR002035: IPR011704; KEGG: nml:Namu_0159 magnesium chelatase; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; SPTR: Magnesium chelatase; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.
  
  
 0.494
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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