STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_B01503WRKY domain-containing protein. (343 aa)    
Predicted Functional Partners:
EUGRSUZ_G01961
Uncharacterized protein.
      
 0.588
EUGRSUZ_C02587
RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II.
      
 0.520
A0A059CJM3
Homeobox domain-containing protein.
      
 0.457
A0A059BBR6
PHD-type domain-containing protein.
    
 
 0.450
A0A059BC26
Homeobox domain-containing protein.
    
 
 0.450
EUGRSUZ_K01050
RRM domain-containing protein.
      
 0.448
EUGRSUZ_E00075
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
      
 0.447
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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