STRINGSTRING
XP_010047497.1 protein (Eucalyptus grandis) - STRING interaction network
"XP_010047497.1" - Uncharacterized protein in Eucalyptus grandis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010047497.1Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns (325 aa)    
Predicted Functional Partners:
XP_010048437.1
Protein TRANSPARENT TESTA GLABRA 1 (341 aa)
       
 
  0.750
XP_010064216.1
Protein TRANSPARENT TESTA 1 (269 aa)
       
 
  0.742
XP_010060970.1
Uncharacterized protein; Dihydroflavonol-4-reductase (337 aa)
           
  0.608
XP_010033486.1
Uncharacterized protein; Naringenin,2-oxoglutarate 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family (363 aa)
       
 
  0.606
XP_010052463.1
Uncharacterized protein; Anthocyanidin reductase-like (337 aa)
           
  0.479
XP_010052358.1
Uncharacterized protein; Anthocyanidin reductase-like (337 aa)
           
  0.479
XP_010053365.1
Uncharacterized protein; Leucoanthocyanidin dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family (353 aa)
       
 
  0.468
XP_010055649.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (630 aa)
       
 
  0.445
XP_010053704.1
Uncharacterized protein; Transcription factor EGL1 (644 aa)
       
 
  0.445
XP_010053253.1
Uncharacterized protein; Transcription factor EGL1-like (637 aa)
       
 
  0.445
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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