STRINGSTRING
XP_010052204.1 protein (Eucalyptus grandis) - STRING interaction network
"XP_010052204.1" - Uncharacterized protein in Eucalyptus grandis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_010052204.1Uncharacterized protein; Transcription factor bHLH30-like (260 aa)    
Predicted Functional Partners:
XP_010054137.1
Protein LHY isoform X1 (732 aa)
           
  0.705
XP_010059965.1
Uncharacterized protein; Topoisomerase 1-associated factor 1 isoform X1 (1260 aa)
       
 
  0.677
XP_010028708.1
Uncharacterized protein LOC104418928 (549 aa)
           
  0.617
XP_010028707.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (566 aa)
           
  0.617
XP_010059188.1
Uncharacterized protein; Allantoinase-like (398 aa)
           
  0.616
XP_010057430.1
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (503 aa)
           
  0.616
XP_010070653.1
BTB/POZ and TAZ domain-containing protein 4-like (381 aa)
     
 
  0.519
XP_010070420.1
BTB/POZ and TAZ domain-containing protein 3-like (406 aa)
     
 
  0.519
XP_010065674.1
Beta-adaptin-like protein C (310 aa)
     
 
  0.519
XP_010063700.1
Uncharacterized protein; Histone acetyltransferase HAC1-like isoform X1 (1724 aa)
     
 
  0.519
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
Server load: low (9%) [HD]