STRINGSTRING
ybgR protein (Pantoea vagans) - STRING interaction network
"ybgR" - Putative zinc transporter ybgR in Pantoea vagans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ybgRPutative zinc transporter ybgR; Co/Zn/Cd efflux system component (329 aa)    
Predicted Functional Partners:
Pvag_0572
Sensory box histidine kinase/response regulator; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain (1013 aa)
         
  0.853
fimZ
Fimbriae Z protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (193 aa)
              0.821
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit; Belongs to the ATPase alpha/beta chains family (513 aa)
     
        0.601
nrdE
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (712 aa)
   
        0.588
nrdA
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (761 aa)
   
        0.588
ybgS
annotation not available (122 aa)
   
   
  0.578
ybar1
Probable copper-transporting ATPase; Cation transport ATPase (837 aa)
 
   
  0.532
zntR
Predicted transcriptional regulators (138 aa)
         
  0.524
zntA
Heavy metal-transporting ATPase; Cation transport ATPase (678 aa)
   
   
  0.468
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions (176 aa)
   
 
  0.459
Your Current Organism:
Pantoea vagans
NCBI taxonomy Id: 712898
Other names: P. vagans C9-1, Pantoea vagans, Pantoea vagans C9-1, Pantoea vagans str. C9-1, Pantoea vagans strain C9-1
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