Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HI_0594 | HI_1107 | HI_0594 | HI_1107 | Conserved hypothetical transmembrane protein; Similar to GB:AE000783 percent identity: 35.02; identified by sequence similarity; putative; To B.subtilis YcgA. | Na+/H+ antiporter (nhaC); Similar to GB:M73530 SP:P27611 PID:143245 PID:2209268 percent identity: 37.50; identified by sequence similarity; putative. | 0.442 |
HI_1107 | HI_0594 | HI_1107 | HI_0594 | Na+/H+ antiporter (nhaC); Similar to GB:M73530 SP:P27611 PID:143245 PID:2209268 percent identity: 37.50; identified by sequence similarity; putative. | Conserved hypothetical transmembrane protein; Similar to GB:AE000783 percent identity: 35.02; identified by sequence similarity; putative; To B.subtilis YcgA. | 0.442 |
HI_1107 | alaA | HI_1107 | HI_0286 | Na+/H+ antiporter (nhaC); Similar to GB:M73530 SP:P27611 PID:143245 PID:2209268 percent identity: 37.50; identified by sequence similarity; putative. | Aminotransferase; Involved in the biosynthesis of alanine. | 0.570 |
HI_1107 | xylR | HI_1107 | HI_1106 | Na+/H+ antiporter (nhaC); Similar to GB:M73530 SP:P27611 PID:143245 PID:2209268 percent identity: 37.50; identified by sequence similarity; putative. | Xylose operon regluatory protein (xylR); Regulatory protein for the xylBAFGHR operon. | 0.514 |
alaA | HI_1107 | HI_0286 | HI_1107 | Aminotransferase; Involved in the biosynthesis of alanine. | Na+/H+ antiporter (nhaC); Similar to GB:M73530 SP:P27611 PID:143245 PID:2209268 percent identity: 37.50; identified by sequence similarity; putative. | 0.570 |
alaA | xylR | HI_0286 | HI_1106 | Aminotransferase; Involved in the biosynthesis of alanine. | Xylose operon regluatory protein (xylR); Regulatory protein for the xylBAFGHR operon. | 0.781 |
xylR | HI_1107 | HI_1106 | HI_1107 | Xylose operon regluatory protein (xylR); Regulatory protein for the xylBAFGHR operon. | Na+/H+ antiporter (nhaC); Similar to GB:M73530 SP:P27611 PID:143245 PID:2209268 percent identity: 37.50; identified by sequence similarity; putative. | 0.514 |
xylR | alaA | HI_1106 | HI_0286 | Xylose operon regluatory protein (xylR); Regulatory protein for the xylBAFGHR operon. | Aminotransferase; Involved in the biosynthesis of alanine. | 0.781 |