STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HI_1671Conserved hypothetical protein; Similar to GB:U00096 PID:1736474 PID:1736480 PID:1788137 percent identity: 43.04; identified by sequence similarity; putative. (416 aa)    
Predicted Functional Partners:
HI_1672
Conserved hypothetical protein; Similar to GB:U00096 PID:1736475 PID:1736481 PID:1788138 percent identity: 42.94; identified by sequence similarity; putative.
  
 0.968
proQ
Predicted coding region HI1670; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
       0.548
prc
Tail specific protease (prc); Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses (By similarity).
       0.451
HI_0367
Conserved hypothetical protein; Similar to SP:P27434 GB:D21149 GB:U02965 GB:X64451 PID:41541 percent identity: 26.33; identified by sequence similarity; putative.
  
     0.449
HI_1669
Conserved hypothetical protein; Similar to SP:P45577 GB:U00096 percent identity: 51.35; identified by sequence similarity; putative.
       0.448
lipB
Lipoate biosynthesis protein B (lipB); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
   
    0.430
HI_1665
Predicted coding region HI1665; Hypothetical protein; identified by GeneMark; putative.
 
     0.412
Your Current Organism:
Haemophilus influenzae
NCBI taxonomy Id: 71421
Other names: H. influenzae Rd KW20, Haemophilus influenzae KW20, Haemophilus influenzae Rd, Haemophilus influenzae Rd KW20
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