STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_00073Unannotated protein. (468 aa)    
Predicted Functional Partners:
GCA_001623405_00072
Unannotated protein.
       0.773
GCA_001623405_02555
Unannotated protein.
  
     0.730
GCA_001623405_00521
Unannotated protein.
  
     0.671
GCA_001623405_00693
Unannotated protein.
  
     0.504
GCA_001623405_01706
Unannotated protein.
  
     0.490
GCA_001623405_00124
Unannotated protein.
  
     0.480
GCA_001623405_01707
Unannotated protein.
  
     0.448
GCA_001623405_01002
Unannotated protein.
  
     0.418
GCA_001623405_01719
Unannotated protein.
  
     0.414
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.