STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623405_00436Unannotated protein. (188 aa)    
Predicted Functional Partners:
GCA_001623405_00434
Unannotated protein.
 0.999
GCA_001623405_00435
Unannotated protein.
 
 0.999
GCA_001623405_00438
Unannotated protein.
 
  
 0.983
GCA_001623405_00835
Unannotated protein.
  
  
 0.812
GCA_001623405_01966
Unannotated protein.
  
  
 0.806
GCA_001623405_00437
Unannotated protein.
 
     0.710
GCA_001623405_00439
Unannotated protein.
 
    0.702
GCA_001623405_00729
Unannotated protein.
   
 
  0.699
GCA_001623405_01790
Unannotated protein.
   
 
  0.699
GCA_001623405_02450
Unannotated protein.
     
 0.525
Your Current Organism:
Hydrotalea flava
NCBI taxonomy Id: 714549
Other names: CCM 7760, CCUG 51397, Chitinophagaceae bacterium CCUG 51397, Chitinophagaceae bacterium CCUG 53736, Chitinophagaceae bacterium CCUG 53920, H. flava, Hydrotalea flava Kampfer et al. 2011 emend. Albuquerque et al. 2012
Server load: low (30%) [HD]