Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ECL_01275 | ECL_01448 | ECL_01275 | ECL_01448 | PTS system, glucose-like IIB subunint. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.865 |
ECL_01275 | ECL_03027 | ECL_01275 | ECL_03027 | PTS system, glucose-like IIB subunint. | Phosphoglucomutase. | 0.891 |
ECL_01275 | ECL_03036 | ECL_01275 | ECL_03036 | PTS system, glucose-like IIB subunint. | N-acetyl glucosamine specific PTS system components IIABC. | 0.993 |
ECL_01275 | glk | ECL_01275 | ECL_03726 | PTS system, glucose-like IIB subunint. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.927 |
ECL_01275 | nagB | ECL_01275 | ECL_03037 | PTS system, glucose-like IIB subunint. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.760 |
ECL_01275 | pgi | ECL_01275 | ECL_00277 | PTS system, glucose-like IIB subunint. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.908 |
ECL_01275 | zwf | ECL_01275 | ECL_01446 | PTS system, glucose-like IIB subunint. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.910 |
ECL_01448 | ECL_01275 | ECL_01448 | ECL_01275 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | PTS system, glucose-like IIB subunint. | 0.865 |
ECL_01448 | ECL_01839 | ECL_01448 | ECL_01839 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | 0.913 |
ECL_01448 | ECL_03027 | ECL_01448 | ECL_03027 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Phosphoglucomutase. | 0.670 |
ECL_01448 | ECL_03036 | ECL_01448 | ECL_03036 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | N-acetyl glucosamine specific PTS system components IIABC. | 0.900 |
ECL_01448 | edd | ECL_01448 | ECL_01447 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.993 |
ECL_01448 | glk | ECL_01448 | ECL_03726 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.886 |
ECL_01448 | nagB | ECL_01448 | ECL_03037 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.442 |
ECL_01448 | pgi | ECL_01448 | ECL_00277 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.791 |
ECL_01448 | zwf | ECL_01448 | ECL_01446 | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.944 |
ECL_01839 | ECL_01448 | ECL_01839 | ECL_01448 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.913 |
ECL_01839 | ECL_03036 | ECL_01839 | ECL_03036 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | N-acetyl glucosamine specific PTS system components IIABC. | 0.570 |
ECL_01839 | edd | ECL_01839 | ECL_01447 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.842 |
ECL_01839 | glk | ECL_01839 | ECL_03726 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.535 |
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