STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcw_1814Serine/threonine protein kinase. (1105 aa)    
Predicted Functional Partners:
wcw_0974
Serine/threonine protein phosphatase.
 
   0.709
wcw_1813
Conserved hypothetical protein; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
       0.586
wcw_0751
Hypothetical protein; Ubiquitin carboxyl-terminal hydrolase.
  
     0.568
sctD
Putative type III secretion system protein SctD; FOG: FHA domain.
   
 
 0.493
wcw_0947
Serine/threonine protein phosphatase.
 
   0.446
wcw_1812
Hypothetical protein.
       0.443
wcw_1525
Hypothetical protein.
   
 
 0.421
wcw_0084
SET domain protein.
  
     0.418
glmU3
UDP-glucose pyrophosphorylase.
  
     0.411
pkn5
Serine/threonine protein kinase.
  
  
 0.405
Your Current Organism:
Waddlia chondrophila
NCBI taxonomy Id: 716544
Other names: W. chondrophila WSU 86-1044, Waddlia chondrophila WSU 86-1044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.