STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7SYD5Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
A0A4Y7TT18
RanBP2-type domain-containing protein.
    
  0.763
A0A4Y7T7M0
P-loop containing nucleoside triphosphate hydrolase protein.
    
   0.669
A0A4Y7TPX1
Uncharacterized protein.
    
   0.661
A0A4Y7TQ34
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.661
A0A4Y7T7K2
SMP-LTD domain-containing protein.
    
 
 0.654
A0A4Y7TYV7
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.654
A0A4Y7T7D3
Vesicular-fusion protein SEC18.
    
  0.651
A0A4Y7TY02
Developmentally regulated GTP-binding protein.
    
   0.646
A0A4Y7TKJ9
Uncharacterized protein.
    
   0.643
A0A4Y7TAP2
t-SNARE; Belongs to the syntaxin family.
    
   0.639
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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