STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TI85Pseudouridine synthase. (504 aa)    
Predicted Functional Partners:
A0A4Y7TM52
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.895
A0A4Y7TH08
WD_REPEATS_REGION domain-containing protein.
   
 
 0.893
A0A4Y7TS74
Pseudouridine synthase.
   
 0.887
A0A4Y7TYK6
Putative rRNA pseudouridine synthase.
   
 0.868
A0A4Y7TXI1
Nop52-domain-containing protein.
   
    0.849
A0A4Y7TUZ1
RPOLD domain-containing protein.
  
  
 0.827
A0A4Y7TWR4
RPOLD domain-containing protein.
  
  
 0.827
A0A4Y7TNY0
Pseudouridine synthase.
   
 
 0.798
A0A4Y7TX04
Uncharacterized protein.
  
   0.798
A0A4Y7TTV6
Uncharacterized protein.
  
   0.797
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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