STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TLQ6SAGA-associated factor 11. (357 aa)    
Predicted Functional Partners:
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
    
 0.981
A0A4Y7SJ74
SCA7-domain-containing protein.
    
 0.979
A0A4Y7T8Y9
TFIID_20kDa domain-containing protein.
    
 0.972
A0A4Y7TFV9
Uncharacterized protein.
    
 0.970
A0A4Y7TB96
Uncharacterized protein.
    
 0.964
A0A4Y7SIU8
Uncharacterized protein.
    
 0.957
A0A4Y7TSV1
TFIID-18kDa-domain-containing protein.
    
 0.957
A0A4Y7TLX2
TFIID and SAGA subunit.
   
 0.954
A0A4Y7SCI8
Ubiquitin carboxyl-terminal hydrolase.
    
 0.948
A0A4Y7TBG0
Ubiquitin carboxyl-terminal hydrolase.
    
 0.948
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.