STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y7TWK9Nuclear mRNA splicing protein. (297 aa)    
Predicted Functional Partners:
A0A4Y7TRX3
Uncharacterized protein.
    
 
 0.972
A0A4Y7U0E7
Pre-mRNA-processing-splicing factor.
    
   0.960
A0A4Y7TQT0
DUF1604-domain-containing protein.
    
 
 0.943
A0A4Y7U1J6
Uncharacterized protein.
   
 
 0.750
A0A4Y7TET2
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.736
A0A4Y7SXK3
mRNA splicing factor.
    
 
 0.718
A0A4Y7TME4
Pre-mRNA splicing factor.
  
 
  
0.714
A0A4Y7SPD3
Kinase-like protein.
    
 0.695
A0A4Y7SQI1
Protein kinase domain-containing protein.
    
 0.695
A0A4Y7T719
Protein kinase domain-containing protein.
    
 0.695
Your Current Organism:
Coprinellus micaceus
NCBI taxonomy Id: 71717
Other names: C. micaceus, Coprinus micaceus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.