STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA56857.1PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (342 aa)    
Predicted Functional Partners:
AGA56858.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
  0.997
AGA58792.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
  0.983
AGA58793.1
PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 
0.923
AGA56580.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.840
AGA56688.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.840
AGA57635.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.840
AGA58967.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.840
AGA59307.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.840
AGA59828.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.840
AGA57273.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.838
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.