STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA57399.1PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (365 aa)    
Predicted Functional Partners:
AGA57398.1
HAMP domain-containing protein,histidine kinase,cache domain-containing protein; PFAM: Histidine kinase; Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
  0.967
AGA57667.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase; HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.877
AGA57175.1
HAMP domain-containing protein,histidine kinase,cache domain-containing protein; PFAM: Histidine kinase; Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.872
AGA56315.1
PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
  0.864
AGA57050.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase; HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
  0.862
AGA56673.1
PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.855
AGA59059.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.855
AGA56280.1
PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.853
AGA59280.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.853
AGA57447.1
PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
  0.849
Your Current Organism:
Thermobacillus composti
NCBI taxonomy Id: 717605
Other names: T. composti KWC4, Thermobacillus composti DSM 18247, Thermobacillus composti KWC4, Thermobacillus composti str. KWC4, Thermobacillus composti strain KWC4, Thermobacillus sp. KWC4
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