STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ89652.1KEGG: rsh:Rsph17029_3032 hypothetical protein. (324 aa)    
Predicted Functional Partners:
ADZ89653.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: rsh:Rsph17029_3033 hypothetical protein.
 
  
 0.962
ADZ90186.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: mmw:Mmwyl1_1910 hypothetical protein.
 
  
 0.866
ADZ90694.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: mmw:Mmwyl1_3911 hypothetical protein.
 
  
 0.866
ADZ92148.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: vfm:VFMJ11_1919 TctA protein.
 
  
 0.866
ADZ92147.1
KEGG: pin:Ping_1872 putative tricarboxylic transport TctB.
  
  
 0.639
ADZ90856.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: mmw:Mmwyl1_3117 tripartite ATP-independent periplasmic transporter DctQ.
  
     0.453
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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