STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90062.1TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: vsp:VS_1326 putative protein disaggregation chaperone; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family. (873 aa)    
Predicted Functional Partners:
ADZ90058.1
PFAM: Protein of unknown function DUF877; KEGG: vsp:VS_1330 hypothetical protein.
 
 0.962
ADZ90057.1
Type VI secretion protein, EvpB/VC_A0108 family; KEGG: vsp:VS_1331 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
 0.955
ADZ90060.1
KEGG: vsp:VS_1328 hypothetical protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.949
ADZ90056.1
Type VI secretion protein, VC_A0107 family; KEGG: vsp:VS_1332 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.945
ADZ90061.1
PFAM: Protein of unknown function DUF1305; KEGG: vsp:VS_1327 hypothetical protein.
 
  
 0.929
ADZ92877.1
TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: pca:Pcar_2820 heat shock protein ClpB-like; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family.
  
  
 
0.909
ADZ90050.1
Type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; KEGG: vsp:VS_1337 hypothetical protein.
 
  
 0.895
ADZ90054.1
KEGG: vsp:VS_1334 hypothetical protein.
 
  
 0.880
ADZ90067.1
KEGG: vsp:VS_1319 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; PFAM: Type IV / VI secretion system, DotU; Sporulation-related domain.
 
  
 0.875
ADZ90066.1
Type VI secretion protein, VC_A0114 family; KEGG: vsp:VS_1320 hypothetical protein; TIGRFAM: Protein of unknown function DUF876; PFAM: Protein of unknown function DUF876.
 
  
 0.873
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.