STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ90467.1KEGG: pat:Patl_0281 tryptophan-rich ignore; TIGRFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich. (71 aa)    
Predicted Functional Partners:
ADZ92645.1
KEGG: vsp:VS_II0127 hypothetical protein.
 
     0.677
ADZ92018.1
KEGG: cps:CPS_2516 hypothetical protein.
  
     0.671
ADZ91175.1
PFAM: Protein of unknown function DUF2164; KEGG: abo:ABO_1538 hypothetical protein.
  
     0.537
ADZ90466.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: mmw:Mmwyl1_3330 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
       0.439
ADZ90328.1
PFAM: Domain of unknown function DUF523; Domain of unknown function DUF1722; KEGG: mmw:Mmwyl1_1153 hypothetical protein.
       0.420
ADZ92203.1
KEGG: mmw:Mmwyl1_3618 anti-ECFsigma factor, ChrR.
  
     0.403
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.