node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCB64408.1 | CCB65651.1 | HYPMC_1177 | HYPMC_2434 | Signal peptidase I (SPase I) (leader peptidase I); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S26 family. | DNA polymerase LigD, ligase domain protein. | 0.744 |
CCB65252.1 | CCB65651.1 | HYPMC_2030 | HYPMC_2434 | AAA ATPase. | DNA polymerase LigD, ligase domain protein. | 0.819 |
CCB65252.1 | CCB65861.1 | HYPMC_2030 | HYPMC_2644 | AAA ATPase. | Protein of unknown function; No homology to any previously reported sequences. | 0.601 |
CCB65252.1 | dnaN | HYPMC_2030 | HYPMC_0002 | AAA ATPase. | DNA polymerase III, beta-subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
CCB65252.1 | polA | HYPMC_2030 | HYPMC_3913 | AAA ATPase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.951 |
CCB65252.1 | xthA | HYPMC_2030 | HYPMC_2696 | AAA ATPase. | Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI); Function of strongly homologous gene; enzyme. | 0.803 |
CCB65650.1 | CCB65651.1 | HYPMC_2433 | HYPMC_2434 | DNA polymerase LigD, polymerase domain protein. | DNA polymerase LigD, ligase domain protein. | 0.999 |
CCB65650.1 | ku | HYPMC_2433 | HYPMC_2435 | DNA polymerase LigD, polymerase domain protein. | Putative DNA repair protein Hden_1068; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.913 |
CCB65650.1 | polA | HYPMC_2433 | HYPMC_3913 | DNA polymerase LigD, polymerase domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.447 |
CCB65651.1 | CCB64408.1 | HYPMC_2434 | HYPMC_1177 | DNA polymerase LigD, ligase domain protein. | Signal peptidase I (SPase I) (leader peptidase I); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S26 family. | 0.744 |
CCB65651.1 | CCB65252.1 | HYPMC_2434 | HYPMC_2030 | DNA polymerase LigD, ligase domain protein. | AAA ATPase. | 0.819 |
CCB65651.1 | CCB65650.1 | HYPMC_2434 | HYPMC_2433 | DNA polymerase LigD, ligase domain protein. | DNA polymerase LigD, polymerase domain protein. | 0.999 |
CCB65651.1 | CCB65861.1 | HYPMC_2434 | HYPMC_2644 | DNA polymerase LigD, ligase domain protein. | Protein of unknown function; No homology to any previously reported sequences. | 0.736 |
CCB65651.1 | CCB67077.1 | HYPMC_2434 | HYPMC_3867 | DNA polymerase LigD, ligase domain protein. | Homologs of previously reported genes of unknown function. | 0.804 |
CCB65651.1 | dnaN | HYPMC_2434 | HYPMC_0002 | DNA polymerase LigD, ligase domain protein. | DNA polymerase III, beta-subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.968 |
CCB65651.1 | ku | HYPMC_2434 | HYPMC_2435 | DNA polymerase LigD, ligase domain protein. | Putative DNA repair protein Hden_1068; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.856 |
CCB65651.1 | polA | HYPMC_2434 | HYPMC_3913 | DNA polymerase LigD, ligase domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.950 |
CCB65651.1 | rpoB | HYPMC_2434 | HYPMC_2583 | DNA polymerase LigD, ligase domain protein. | RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.688 |
CCB65651.1 | xthA | HYPMC_2434 | HYPMC_2696 | DNA polymerase LigD, ligase domain protein. | Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI); Function of strongly homologous gene; enzyme. | 0.821 |
CCB65861.1 | CCB65252.1 | HYPMC_2644 | HYPMC_2030 | Protein of unknown function; No homology to any previously reported sequences. | AAA ATPase. | 0.601 |