STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_04670Hypothetical protein. (124 aa)    
Predicted Functional Partners:
EC1_04660
Small GTP-binding protein domain.
 
     0.764
EC1_04680
Hypothetical protein.
       0.564
EC1_06280
Cna protein B-type domain.
  
    0.528
EC1_06770
Cna protein B-type domain.
  
    0.448
EC1_01450
Site-specific recombinases, DNA invertase Pin homologs.
 
     0.423
EC1_09730
Hypothetical protein.
  
     0.420
EC1_04690
Hypothetical protein.
       0.407
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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