STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_18840X-X-X-Leu-X-X-Gly heptad repeats. (770 aa)    
Predicted Functional Partners:
EC1_18850
Predicted exporters of the RND superfamily.
   
 0.994
EC1_18860
Hypothetical protein.
 
   
 0.943
EC1_18870
Transcriptional regulator.
 
  
 0.907
EC1_18550
Response regulator of the LytR/AlgR family.
 
    0.585
EC1_20570
Hypothetical protein.
  
     0.516
EC1_11190
FOG: FHA domain.
 
     0.493
EC1_07700
Hypothetical protein.
  
     0.455
EC1_18830
Hypothetical protein.
       0.436
EC1_12740
Glutamate synthase domain 2.
       0.434
EC1_07550
NlpC/P60 family.
  
     0.427
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.