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GH12416 protein (Drosophila grimshawi) - STRING interaction network
GH12416 in Drosophila grimshawi
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GH12416GH12416; It is involved in the biological process described with- nucleosome assembly; Belongs to the nucleosome assembly protein (NAP) family (390 aa)    
Predicted Functional Partners:
GH10352
Histone H2A; DNA binding; protein heterodimerization activity; Belongs to the histone H2A family (152 aa)
     
 
  0.759
GH23929
GH23929; Zinc ion binding; protein heterodimerization activity (1591 aa)
       
      0.720
GH18333
GH18333; Zinc ion binding (1202 aa)
       
      0.716
GH21659
GH21659; Ran GTPase binding. It is involved in the biological process described with- intracellular protein transport (1025 aa)
     
 
  0.690
GH21151
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (744 aa)
     
 
  0.687
GH22017
GH22017; It is involved in the biological process described with- ribosomal large subunit biogenesis; actin cytoskeleton organization; ribosomal large subunit export from nucleus (731 aa)
     
 
  0.672
GH24620
40S ribosomal protein S6; Structural constituent of ribosome. It is involved in the biological process described with- translation; Belongs to the eukaryotic ribosomal protein eS6 family (248 aa)
     
 
  0.629
GH18408
GH18408; Structural constituent of ribosome. It is involved in the biological process described with- translation (401 aa)
     
        0.587
GH16942
GH16942; It is involved in the biological process described with- chromatin assembly or disassembly (222 aa)
     
   
  0.576
GH18852
GH18852; It is involved in the biological process described with- nucleosome assembly; Belongs to the nucleosome assembly protein (NAP) family (265 aa)
     
 
0.563
Your Current Organism:
Drosophila grimshawi
NCBI taxonomy Id: 7222
Other names: D. grimshawi, Drosophila grimshawi, Idiomyia grimshawi
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