STRINGSTRING
CG11403 protein (fruit fly) - STRING interaction network
"CG11403" - ATP-dependent DNA helicase activity in Drosophila melanogaster
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG11403ATP-dependent DNA helicase activity; helicase activity (861 aa)    
Predicted Functional Partners:
mrn
Marionette (499 aa)
     
 
  0.889
Mat1
Mat1 (320 aa)
     
 
  0.882
Tfb1
Tfb1; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II (585 aa)
     
 
  0.861
TfIIEalpha
Sequence-specific DNA binding (429 aa)
     
 
  0.835
Ssl1
Ssl1 (438 aa)
     
 
  0.816
TfIIEbeta
Transcription factor IIEbeta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (292 aa)
       
 
  0.809
Sym
Symplekin; Component of a protein complex required for cotranscriptional processing of 3’-ends of polyadenylated and histone pre-mRNA (1165 aa)
     
      0.808
Tfb4
Tfb4 (299 aa)
     
 
  0.795
Ssu72
Ssu72 ortholog (195 aa)
     
      0.789
Tfb5
TFB5 ortholog (S. cerevisiae) (73 aa)
       
 
  0.784
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Drosophila melanogaster, fruit fly
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