STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG9609LD35155p; DNA-binding transcription factor activity, RNA polymerase II-specific; sequence-specific DNA binding; cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II. (403 aa)    
Predicted Functional Partners:
TwdlF
LD19715p; Structural constituent of chitin-based larval cuticle. It is involved in the biological process described with: chitin-based cuticle development.
    
 
 0.672
CG7099
B-block_TFIIIC domain-containing protein; It is involved in the biological process described with: transcription initiation from RNA polymerase III promoter; 5S class rRNA transcription by RNA polymerase III.
    
 
 0.668
mil
AT14585p; Milkah (mil) encodes a nucleosome assembly factor of the Nap family. It is involved in spermatogenesis, long-term memory formation and male courtship.
    
 
 0.606
mRpL18
Mitochondrial ribosomal protein L18; 5S rRNA binding; structural constituent of ribosome. It is involved in the biological process described with: translation; mitochondrial translation.
   
 
 0.570
Bdp1
B double prime 1 (Bdp1) encodes a transcription factor involved in snRNA gene transcription.
   
 
 0.552
CG1234
Nucleolar complex protein 3 homolog; Chromatin binding.
   
   0.546
mRpS25
Probable 28S ribosomal protein S25, mitochondrial; Structural constituent of ribosome. It is involved in the biological process described with: translation; mitochondrial translation.
   
 
 0.518
Xpc
DNA repair protein complementing XP-C cells homolog; Involved in DNA excision repair. May play a part in DNA damage recognition and/or in altering chromatin structure to allow access by damage-processing enzymes (By similarity).
   
  
 0.508
CG14814
Uncharacterized protein, isoform B.
   
  
 0.496
CG2712
LD39664p; DNA-binding transcription factor activity; zinc ion binding; transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription, DNA-templated.
  
    0.488
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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