STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG8319LP19870p; Zinc ion binding; DNA-binding transcription factor activity; transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription, DNA-templated. (383 aa)    
Predicted Functional Partners:
Arc42
SD24551p; Flavin adenine dinucleotide binding; butyryl-CoA dehydrogenase activity; acyl-CoA dehydrogenase activity. It is involved in the biological process described with: oxidation-reduction process; butyrate catabolic process.
      
 0.672
CG4820
Uncharacterized protein; DNA-binding transcription factor activity; zinc ion binding; DNA binding. It is involved in the biological process described with: regulation of gene expression; regulation of transcription, DNA-templated.
  
  
 0.634
CG17186
IP01220p; Nucleic acid binding.
   
  
 0.546
bon
Bonus, isoform C; Bonus (bon) encodes a nuclear receptor cofactor involved in axon guidance and chromatin organization.
   
 0.537
Psf3
Psf3, isoform A; 3'-5' DNA helicase activity.
      
 0.524
CG6254
LD13728p; Zinc ion binding; nucleic acid binding. It is involved in the biological process described with: regulation of gene expression; negative regulation of transcription, DNA-templated.
  
  
0.519
CG12219
LD26135p; Zinc ion binding; DNA-binding transcription factor activity; transcription regulatory region sequence-specific DNA binding; DNA binding. It is involved in the biological process described with: regulation of gene expression; regulation of transcription, DNA-templated.
   
  
 0.506
CG14294
GEO08695p1.
      
 0.495
CG10887
MIP29558p; RNA polymerase II C-terminal domain phosphoserine binding. It is involved in the biological process described with: positive regulation of transcription elongation from RNA polymerase II promoter; histone modification.
      
 0.495
CG14292
Uncharacterized protein.
      
 0.461
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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