STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG4884MIP05919p; RNA binding. It is involved in the biological process described with: regulation of mitochondrial transcription. (189 aa)    
Predicted Functional Partners:
mRpL13
39S ribosomal protein L13, mitochondrial; mRNA binding; structural constituent of ribosome. It is involved in the biological process described with: negative regulation of translation; mitochondrial translation; translation; Belongs to the universal ribosomal protein uL13 family.
   
   0.767
mRpL11
39S ribosomal protein L11, mitochondrial; Structural constituent of ribosome; large ribosomal subunit rRNA binding; rRNA binding. It is involved in the biological process described with: mitochondrial translation; translation; ribosomal large subunit assembly; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.764
CG6094
CG6094 protein; aminoacyl-tRNA hydrolase activity; translation release factor activity, codon nonspecific. It is involved in the biological process described with: mitochondrial translational termination.
   
 
 0.758
mRpL40
Mitochondrial ribosomal protein L40; Structural constituent of ribosome. It is involved in the biological process described with: mitochondrial translation.
   
   0.745
mRpL16
Mitochondrial ribosomal protein L16, isoform A; Structural constituent of ribosome; rRNA binding. It is involved in the biological process described with: mitochondrial translation.
   
   0.741
mRpL9
39S ribosomal protein L9, mitochondrial; Structural constituent of ribosome. It is involved in the biological process described with: mitochondrial translation; translation; Belongs to the bacterial ribosomal protein bL9 family.
   
   0.740
mRpL22
39S ribosomal protein L22, mitochondrial; Structural constituent of ribosome. It is involved in the biological process described with: mitochondrial translation; ribosome assembly; translation; Belongs to the universal ribosomal protein uL22 family.
   
   0.734
JhI-26
Juvenile hormone-inducible protein 26 (JhI-26) encodes a sperm protein. Overexpression of JhI-26 in males causes upregulation of the male accessory gland protein (Acp) gene CG10433, higher embryonic lethality and reduction of receptivity to remating in mated females.
    
 
 0.727
mRpL32
39S ribosomal protein L32, mitochondrial; Structural constituent of ribosome. It is involved in the biological process described with: translation; mitochondrial translation.
  
   0.693
mRpL19
39S ribosomal protein L19, mitochondrial; Structural constituent of ribosome. It is involved in the biological process described with: translation; mitochondrial translation; Belongs to the bacterial ribosomal protein bL19 family.
  
   0.692
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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