STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsp42EdTetraspanin. (227 aa)    
Predicted Functional Partners:
CG30159
GH17623p.
 
    
 0.839
CG15347
LP18071p.
   
    0.700
CG4511
GM03430p.
      
 0.670
CG10731
Uncharacterized protein, isoform B; It is involved in the biological process described with: proton transmembrane transport.
      
 0.531
CG10444
LD47995p; Symporter activity. It is involved in the biological process described with: sodium ion transport; transmembrane transport; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.523
Cpr49Ad
Cuticular protein 49Ad; Structural constituent of cuticle; structural constituent of chitin-based larval cuticle. It is involved in the biological process described with: chitin-based cuticle development.
      
 0.495
CG1646
Pre-mRNA-processing factor 39; Involved in pre-mRNA splicing.
      
 0.489
Ude
Uracil-DNA degrading factor, isoform B; Uracil-DNA degrading factor (Ude) encodes a DNA-processing enzyme with uracil-DNA-degrading activity.
   
  
 0.467
CG16713
RH15675p; Serine-type endopeptidase inhibitor activity.
   
  
 0.466
smid
Smallminded, isoform A; Preribosome binding; ATPase activity; ATP binding. It is involved in the biological process described with: positive regulation of telomerase activity; ribosome biogenesis.
      
 0.463
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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