STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rrp42IP10364p; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: mRNA processing; neurogenesis (296 aa)    
Predicted Functional Partners:
Rrp4
Rrp4, isoform A; 3'-5'-exoribonuclease activity; RNA binding. It is involved in the biological process described with: regulation of gene expression; mRNA processing
  
 0.999
Rrp47
Ribosomal RNA processing 47, isoform A; It is involved in the biological process described with: regulation of gene expression
   
 0.999
Mtr3
FI01414p; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: regulation of gene expression
 
 0.999
Rrp40
Ribosomal RNA processing 40, isoform A; 3'-5'-exoribonuclease activity; RNA binding. It is involved in the biological process described with: regulation of gene expression; rRNA processing
  
 0.999
Csl4
RE36848p; 3'-5'-exoribonuclease activity; RNA binding. It is involved in the biological process described with: regulation of gene expression; mRNA processing
   
 0.999
Ski6
Ski6, isoform A; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: regulation of gene expression
 
 0.999
Rrp46
FI06805p; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: regulation of gene expression; mRNA processing
 
 0.999
Dis3
Dis3, isoform A; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: regulation of gene expression; nuclear RNA surveillance; mRNA processing; neurogenesis; Belongs to the RNR ribonuclease family
   
 0.999
Rrp6
Rrp6, isoform B; 3'-5' exonuclease activity; nucleotide binding; nucleic acid binding. It is involved in the biological process described with: regulation of gene expression; nuclear RNA surveillance; mRNA polyadenylation
   
 0.999
Rrp45
Rrp45, isoform A; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: mRNA processing
  
0.998
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Drosophila melanogaster, fruit fly
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