STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YME1LATP-dependent zinc metalloprotease YME1L; ATP-dependent metalloprotease that catalyzes the degradation of folded and unfolded proteins with a suitable degron sequence in the mitochondrial intermembrane region. Plays an important role in regulating mitochondrial morphology and function by cleaving Opa1, giving rise to a form of Opa1 that promotes maintenance of normal mitochondrial structure and mitochondrial protein metabolism. Ensures cell proliferation, maintains normal cristae morphology and complex I respiration activity, promotes antiapoptotic activity and protects mitochondria fr [...] (740 aa)    
Predicted Functional Partners:
rho-7
Rhomboid-7, isoform A; Rhomboid-7 (rho-7) encodes an intramembrane serine protease of the rhomboid family present in the inner membrane of mitochondria. It regulates mitochondrial fusion during spermatogenesis and muscle development. rho-7 genetically interacts with fog, Opa1 and Pink1.
   
  
 0.955
ND-B16.6
NADH dehydrogenase (ubiquinone) activity. It is involved in the biological process described with: mitochondrial electron transport, NADH to ubiquinone.
   
   0.935
140up
RPII140-upstream gene protein; Essential for viability.
    
   0.934
ClpX
Uncharacterized protein, isoform C; ATP binding; ATPase activity; unfolded protein binding. It is involved in the biological process described with: protein catabolic process; proteolysis; proteolysis involved in cellular protein catabolic process; regulation of mitochondrial gene expression; protein folding.
  
  
 0.929
Phb2
Prohibitin.
   
 
 0.892
ClpP
ATP-dependent Clp protease proteolytic subunit; ATP-dependent peptidase activity; ATPase binding; serine-type endopeptidase activity. It is involved in the biological process described with: protein quality control for misfolded or incompletely synthesized proteins; proteolysis involved in cellular protein catabolic process; regulation of mitochondrial gene expression.
  
 
 0.851
Lon
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner. Regulates mitochondrial DNA (mtDNA) copy number and transcription by [...]
  
 
 0.835
Spg7
Paraplegin, isoform A; Metallopeptidase activity; metalloendopeptidase activity; zinc ion binding; ATPase activity; ATP binding. It is involved in the biological process described with: mitochondrion organization; proteolysis.
  
0.824
l(2)37Cc
Protein l(2)37Cc; Required for larval metabolism or for the progression of the larva into a pupa; Belongs to the prohibitin family.
   
 
 0.816
CG16984
AT01695p; Calmodulin binding.
  
  
 0.806
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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