STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_3169ATP-binding Cassette (ABC) Superfamily. (590 aa)    
Predicted Functional Partners:
THOM_2794
ATP-binding Cassette (ABC) Superfamily.
  
 0.669
THOM_0392
Putative Brix domain protein.
   
 0.618
THOM_2152
Putative starch-binding protein.
   
 
 0.467
THOM_2414
cAMP-dependent protein kinase catalytic subunit (PKA); Belongs to the protein kinase superfamily.
   
 
  0.447
THOM_2212
ATP-binding Cassette (ABC) Superfamily.
 
     0.402
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.