STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2265RNAse L inhibitor, ABC superfamily. (604 aa)    
Predicted Functional Partners:
THOM_3009
Peptide chain release factor 1 (ERF1).
   
 
 0.994
THOM_1963
60S acidic ribosomal protein P0.
   
 
 0.905
THOM_1302
G protein beta subunit-like protein.
   
 
 0.903
THOM_0597
40S ribosomal protein S3.
   
 
 0.897
THOM_2573
40S ribosomal protein S6.
   
   0.895
THOM_0609
40S ribosomal protein S28.
   
   0.893
THOM_3123
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.891
THOM_0096
40S ribosomal protein S3A.
   
 
 0.888
THOM_2204
Translation initiation factor 2, alpha subunit (EIF-2alpha).
   
 
 0.883
THOM_2936
Translation initiation factor 1 (EIF-1/SUI1).
   
 
 0.883
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.