STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_1619Small Conductance Mechanosensitive Ion Channel (MscS) Family. (513 aa)    
Predicted Functional Partners:
THOM_1992
Putative WD40/YVTN repeat-like-containing domain, WD40 repeat protein.
   
 0.999
THOM_1085
Putative WD40/YVTN repeat-like-containing domain, WD40 repeat-like-containing domain protein.
   
 0.999
THOM_0995
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 0.999
THOM_1765
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 
 0.998
THOM_1073
Putative WD40/YVTN repeat-like-containing domain, WD40 repeat protein.
   
 0.996
THOM_0487
Uncharacterized protein.
   
 
 0.994
THOM_2876
U3 small nucleolar ribonucleoprotein (snoRNP) component.
   
  0.993
THOM_1858
GTP-binding protein AARP2 involved in 40S ribosome biogenesis.
   
 
 0.993
THOM_2455
rRNA processing protein.
   
 
 0.992
THOM_2403
Uncharacterized protein.
   
 
 0.990
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.