STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GA18292Ubiquitin thioesterase OTU1; Hydrolase that can remove conjugated ubiquitin from proteins and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (358 aa)    
Predicted Functional Partners:
GA19461
Uncharacterized protein; It is involved in the biological process described with: ubiquitin-dependent protein catabolic process
   
 
 0.951
GA18345
Uncharacterized protein, isoform A; Zinc ion binding
   
 
 0.948
GA15351
Uncharacterized protein, isoform A; ATP binding; hydrolase activity; Belongs to the AAA ATPase family
   
 
 0.920
GA18662
annotation not available
   
 
 0.902
GA30006
annotation not available
   
 
 0.873
GA15543
Uncharacterized protein; Structural constituent of ribosome. It is involved in the biological process described with: translation
   
   0.865
GA20638
annotation not available
      
 0.817
GA11383
Ubiquitinyl hydrolase activity; zinc ion binding; omega peptidase activity. It is involved in the biological process described with: ubiquitin-dependent protein catabolic process
   
  
 0.810
GA17200
annotation not available
   
 
 0.769
GA10787
annotation not available
   
 
 0.764
Your Current Organism:
Drosophila pseudoobscura
NCBI taxonomy Id: 7237
Other names: D. pseudoobscura, Drosophila pseudoobscura
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