STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KNH6_EUTSAUncharacterized protein. (327 aa)    
Predicted Functional Partners:
V4L977_EUTSA
HECT domain-containing protein.
     
 0.716
V4LRA0_EUTSA
HECT domain-containing protein.
     
 0.698
V4LW42_EUTSA
AA_kinase domain-containing protein.
      
 0.544
V4K204_EUTSA
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.517
V4L3U7_EUTSA
Ubiquitin-like domain-containing protein.
    
  0.426
V4LVC5_EUTSA
Ubiquitin-like domain-containing protein.
    
  0.426
V4N2E1_EUTSA
Ubiquitin-like domain-containing protein.
    
  0.426
V4L9B8_EUTSA
RING-type domain-containing protein.
      
 0.410
V4KYD8_EUTSA
ThiF domain-containing protein.
    
  0.404
V4LDZ0_EUTSA
E2_bind domain-containing protein.
    
  0.404
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
Server load: medium (68%) [HD]