STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KKN7_EUTSAAP2/ERF domain-containing protein. (252 aa)    
Predicted Functional Partners:
V4L3X5_EUTSA
Aminotran_1_2 domain-containing protein.
   
  
 0.655
V4M890_EUTSA
Uncharacterized protein.
   
 
 0.652
V4KHY4_EUTSA
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.595
V4LK71_EUTSA
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.552
V4M953_EUTSA
Uncharacterized protein.
   
 
 0.518
V4KGI2_EUTSA
Dof-type domain-containing protein.
  
    0.512
V4LBD4_EUTSA
Dof-type domain-containing protein.
  
    0.512
V4LC90_EUTSA
VQ domain-containing protein.
   
  
 0.501
V4LD72_EUTSA
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.487
V4LRZ0_EUTSA
Dof-type domain-containing protein.
  
     0.485
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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